Publications

Journals

Bourne RM, Bailey C, Johnston EW, Pye H, Heavey S, Whitaker H, Siow B, Freeman A, Shaw GL, Sridhar A, Mertzanidou T, Hawkes DJ, Alexander DC, Punwani S and Panagiotaki E (2017). Apparatus for histological validation of in vivo and ex vivo magnetic resonance imaging of the human prostate. Front. Oncol. 7:47. doi: 10.3389/fonc.2017.00047

Bourne R, Panagiotaki E. Limitations and Prospects for Diffusion-Weighted MRI of the Prostate. Diagnostics (Basel, Switzerland) 6(2) 2016

Bailey CEM, Siow B, Panagiotaki E, Hipwell JH, Mertzanidou T, Owen J, Gazinska P, Pinder SE, Alexander DC, Hawkes DJ.Microstructure models for diffusion MRI in breast cancer and surrounding stroma: an ex vivo study NMR in Biomedicine  2016

Liang S, Panagiotaki E, Bongers A, Shi P, Sved P, Watson G, Bourne R. Information-based ranking of 10 compartment models of diffusion-weighted signal attenuation in fixed prostate tissue NMR IN BIOMEDICINE 29(5):660-671 21 2016

IRcoverJohnston EW, Pye H, Bonet-Carne E, Panagiotaki E, Patel D, Galazi, Heavey S, Carmona L, Freeman A, Trevisan G, et al. INNOVATE: A prospective cohort study combining serum and urinary biomarkers with novel diffusion-weighted magnetic resonance imaging for the prediction and characterization of prostate cancer. BMC Cancer 2016

Panagiotaki, E., Chan, R. W., Dikaios, N., Ahmed, H., Atkinson, D., Punwani, S., Hawkes, D. J., Alexander, D. C. “Microstructural characterisation of normal and malignant human prostate tissue with VERDICT MRI”.Fig5_r1 Investigative Radiology 50 (4), 218-227 2015 doi: 10.1097/RLI.0000000000000115

Panagiotaki, E., Walker-Samuel, S., Siow, B., Johnson, P., Rajkumarc, V., Pedley, R., Lythgoe, Alexander, D. C. “Noninvasive quantification of solid tumor microstructure using VERDICT MRI”. Cancer Research 74 (7), 1902-1912 2014 doi: 10.1158/0008-5472.CAN-13-2511, 2014

WhiteMatterModelsPanagiotaki, E., Schneider, T., Siow, B., Hall, M. G., Lythgoe, M. F., Alexander, D. C. (2012). “Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison”. NeuroImage 59, 2241-2254 2012
 doi: 10.1016/j.neuroimage.2011.09.081

Bourne, R. M., Panagiotaki, E., Bongers, A., Sved, P., Watson, G., & Alexander, D. C. (2013). Information theoretic ranking of four models of diffusion attenuation in fresh and fixed prostate tissue ex vivo. Magnetic Resonance in Medicine. doi:10.1002/mrm.25032

Ferizi, U., Schneider, T., Panagiotaki, E., Nedjati-Gilani, G., Zhang, H., Wheeler-Kingshott, C. A. M., & Alexander, D. C. (2013). A ranking of diffusion MRI compartment models with in vivo human brain data. Magnetic Resonance in Medicine. doi:10.1002/mrm.25080

Richardson, S., Siow, B., Panagiotaki, E., Schneider, T., Lythgoe, M. F., & Alexander, D. C. (2013). Viable and fixed white matter: Diffusion magnetic resonance comparisons and contrasts at physiological temperature. Magn Reson Med. doi:10.1002/mrm.25012

Conferences

Bailey, CEM; Grussu, F; Siow, B; Mertzanidou, T; Hipwell, JH; Owen, J; Gazinska, P;Pinder SE, Alexander DC, Hawkes DJ, Panagiotaki E. (2017) Diffusion anisotropy in breast cancer tissue corresponds to spatial patterns of collagen alignment from structure tensor analysis of histology. Presented at: Annual Meeting of the International Society of Magnetic Resonance in Medicine, Hawaii, USA.

Bailey, C; Bourne, RM; Siow, B; Johnston, EW; Pye, H; Heavey, S; Mertzanidou, T;Alexander DC, Hawkes DJ, Panagiotaki E(2017) Validation of VERDICT MRI using fresh and fixed prostate specimens with aligned histological slices. Presented at: Annual Meeting of the International Society for Magnetic Resonance in Medicine, Hawaii, USA.

Jacobs JG, Panagiotaki E, Freeman A, Brostow G, Alexander DC. Automatic Nuclei Detection in Low Magnification Prostate Histology PROSENSE Conference on Prostate Cancer Diagnosis, Bath, UK, 12 Sep 2016 – 13 Sep 2016. 12 Sep 2016

Bonet-Carne E, Johnston E, Daducci A, Saborowska A, Atkinson D, Punwani S, Alexander DC, Panagiotaki E. Non-invasive quantification of prostate cancer with VERDICT MRI: A repeatability study Prosense, Bath, UK, 12 Sep 2016 – 13 Sep 2016. 12 Sep 2016

Bonet-Carne E, Daducci A,, Johnston E, Stevens N, Atkinson D, Punwani S, Alexander D, Panagiotaki E. AMICO-VERDICT: Ultrafast fitting algorithm for cancer microstructure characterization, a prostate cancer application Young Researchers’ Futures Meeting (YRFM), London, 07 Sep 2016 – 09 Sep 2016. 07 Sep 2016

Bailey CEM, Siow B, Panagiotaki E, Hipwell JH, Pinder SE, Alexander DC, Hawkes DJ. Microstructure models for diffusion MRI in breast cancer and surrounding stroma: an ex vivo study ISMRM 24th Annual Meeting & Exhibition, Singapore, 09 May 2016 – 13 May 2016. 927-927. 09 May 2016

Jacobs JG, Johnston E, Freeman A, Patel D, Rodriguez-Justo M, Atkinson D, Punwani S, Brostow G, Alexander DC, Panagiotaki E. Histological validation of VERDICT cellularity map in a prostatectomy case ISMRM, Singapore, 07 May 2016 – 13 May 2016. 2497-2497. 23 Apr 2016

Bonet-Carne E, Daducci A, Panagiotaki E, Johnston E, Stevens N, Atkinson D, Punwani S, Alexander DC. Non-invasive quantification of prostate cancer using AMICO framework for VERDICT MRI ISMRM, Singapore, 07 May 2016 – 13 May 2016. 3465-3465. 23 Apr 2016

Johnston E, Panagiotaki E, Bonet-Carne E, Stevens N, Atkinson D, Alexander D, Punwani S. Short term repeatability of microstructural (VERDICT) MRI vs. ADC in prostate cancer ISMRM, Singapore, 07 May 2016 – 13 May 2016. 579-579. 23 Apr 2016

Panagiotaki, E., Ianus A., Johnston, E., Chan, R. W., Stevens, N., Atkinson, D., Punwani, S., Hawkes, D.J., Alexander, D. C. (2015). “Optimised VERDICT MRI protocol for prostate cancer characterisation”. Proceedings of the 24rd meeting of the International society for magnetic resonance in medicine (2015)

Bailey C., Panagiotaki E., Tunariu N., Orton M.R., Morgan V.A., Feiweier T., Hawkes D.J., Leach M. O., Collins D. J., Alexander, D. C. (2015). “Modelling tissue microstructure in bone metastases from prostate cancer using VERDICT MRI”. Proceedings of the 24rd meeting of the International society for magnetic resonance in medicine (2015)

Bailey C, Vinnicombe S, Panagiotaki E, Waugh S, Hipwell JH, Whelehan P, Pinder SE, Evans A, Alexander D.C., Hawkes D.J. “Modelling vasculature and cellular restriction in breast tumours using diffusion MRI”. Proceedings of the 24rd meeting of the International society for magnetic resonance in medicine (2015)

Liang, S., Panagiotaki, E., Peng, S., Bourne, R. “Comparison of Seven Compartment Models of Diffusion in Prostate Tissue”. Proceedings of the 24rd meeting of the International society for magnetic resonance in medicine (2015)

Panagiotaki, E., Walker-Samuel, S., Siow, B., Johnson, P., Pedley, R. B., Lythgoe, M. F., & Alexander, D. C. (2014). In vivo characterisation of tumour microstructure with VERDICT MRI. Proceedings of the International society for magnetic resonance in medicine 2014

Panagiotaki, E., Chan, R. W., Dikaios, N., Ahmed, H., Atkinson, D., Punwani, S., Alexander, D. C. (2014). Microstructural characterisation of normal and malignant human prostate tissue with VERDICT-MRI. Proceedings of the International society for magnetic resonance in medicine 2014

Bailey, C., Vinnicombe, S., Panagiotaki, E., Waugh, S. A., Hipwell, J. H., Alexander, D. C., Hawkes, D. J. (2014). Modeling vascularity in breast cancer and surrounding stroma using diffusion MRI and intravoxel incoherent motion. Lecture Notes in Computer Science. Springer.

Panagiotaki, E., Alexander, D. C., & Bourne, R. M. (2013). Comparison of single and multi-compartment models of diffusion in fixed prostate tissue. Proceedings of the International society for magnetic resonance in medicine 2013

Panagiotaki, E., Walker-Samuel, S., Siow, B., Johnson, P., Pedley, R., Lythgow, M. F., & Alexander, D. C. (2013). In vivo characterisation of colorectal tumour microstructure with DW-MRI. Proceedings of the International society for magnetic resonance in medicine 2013

Ferizi, U., Schneider, T., Panagiotaki, E., Nedjati-Gilani, G., Zhang, H., Wheeler-Kingshott, C., & Alexander, D. (2013). RANKING DIFFUSION-MRI MODELS WITH IN-VIVO HUMAN BRAIN DATA.

Ferizi, U., Schneider, T., Panagiotaki, E., Nedjati-Gilani, G., Zhang, H., Wheeler-Kingshott, C., & Alexander, D. (2013). Using in-vivo human brain data to select diffusion MRI compartment models. Proceedings of the International society for magnetic resonance in medicine 2013

Richardson, S., Siow, B., Panagiotaki E., Lythgoe, M. F., Schneider, T., &Alexander D.C. Viable and Fixed White Matter: DTI and Microstructural Comparisons at Physiological Temperature. Proceedings of the International society for magnetic resonance in medicine 2013

Ferizi, U., Panagiotaki, E., Schneider, T., Wheeler-Kingshott, C. A. M., & Alexander, D. C. (2012). White Matter Models of In Vivo Diffusion MRI Human Brain Data: A Statistical Ranking. Proceeding of the 16th Conference on Medical Image Understanding and Analysis.

Panagiotaki, E., Schneider, T., Siow, B., Lythgoe, M. F., Hall, M. G., & Alexander, D. C. (2011). A hierarchy of analytic models for the diffusion MRI signal in brain white matter. Proceedings of the International society for magnetic resonance in medicine 2011

Panagiotaki, E., Hall, M. G., Zhang, H., Siow, B., Lythgoe, M. F., & Alexander, D. C. (2010). High-fidelity meshes from tissue samples for diffusion MRI simulations. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2010

Panagiotaki, E., Hall, M. G., Siow, B., Lythgoe, M. F., & Alexander, D. C. (2010). Three-dimensional models of tissue microstructure for simulating high-precision diffusion MRI data. Proceedings of the International society for magnetic resonance in medicine 2010

Panagiotaki, E., Fonteijn, H. M., Nedjati-Gilani, S., Hall, M. G., & Alexander, D. C. (2009). Exploring analytic models of the diffusion MR signal in fixed rat brain tissue. Proceedings of the International society for magnetic resonance in medicine 2009

Panagiotaki, E., Fonteijn, H., Siow, B., Hall, M. G., Price, A., Lythgoe, M. F., & Alexander, D. C. (2009). Two-compartment models of the diffusion MR signal in brain white matter. , 1, 329-336. Medical Image Computing and Computer-Assisted Intervention–MICCAI 2009

Doctoral Dissertation

Panagiotaki, E. (2011). Geometric models of brain white matter for microstructure imaging with diffusion MRI .